PSI-BLAST

Multiple Iteration of Multiple Sequences

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A name for the run
Paste the sequence in the window(File should be in FASTA format and not have more than 50 Query Sequence)
or upload a file containing the sequence (FASTA format only)
Choose a file to upload:(LIMIT UPTO 100KB)
Advanced Options
Maximum number of iterations for PSSM E-value cutoff for PSI-BLAST search
Database
No. of Alignment
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman
(1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.

Reference:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics
and other refinements", Nucleic Acids Res. 29:2994-3005.
Developed By:- Bioinformatics-Group@IIAR,Gujarat